BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012G08LP1|AL426416
(719 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1743 1207 0.0
>3x_Contig1743
Length = 20172
Score = 1207 bits (578), Expect = 0.0
Identities = 658/720 (91%), Gaps = 1/720 (0%)
Strand = Plus / Plus
Query: 1 attcactgatatctacagcggagggcgccgttttatacggtggttacac-aaggtaaaag 59
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 11452 attcactgatatctacagcggagggcgccgttttatacggtggttacaccaaggtaaaag 11511
Query: 60 ccggcawwggcttacaaammggtaagattctatcagactgttggtatctgamgatgamat 119
|||||| |||||||||| ||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 11512 ccggcaaaggcttacaaaaaggtaagattctatcagactgttggtatctgaagatgaaat 11571
Query: 120 ccgatctgggttccattagatgggaaagamggaagamacagggttcccaaccatctccaa 179
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 11572 ccgatctgggttccattagatgggaaagaaggaagaaacagggttcccaaccatctccaa 11631
Query: 180 gagttggctgttctatggttcatcataagggaagaggtgttttgtttggaggtgtctacg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11632 gagttggctgttctatggttcatcataagggaagaggtgttttgtttggaggtgtctacg 11691
Query: 240 actttgaagaaacagaagamagtctaagabcmatctttyacmacgaactatacacatatc 299
||||||||||||||||||| ||||||||| | |||||| || ||||||||||||||||||
Sbjct: 11692 actttgaagaaacagaagaaagtctaagatcaatcttttacaacgaactatacacatatc 11751
Query: 300 agayagamaabmacagatggtatgcmatgtccttgagacctcamaggaagaagaagaact 359
||| ||| || ||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 11752 agatagaaaataacagatggtatgcaatgtccttgagacctcaaaggaagaagaagaact 11811
Query: 360 tcgttcaatcgaagtccaacaggaacamagataaasamcttgamgatattyysmmtcama 419
||||||||||||||||||||||||||| ||||||| | ||||| |||||| ||| |
Sbjct: 11812 tcgttcaatcgaagtccaacaggaacaaagataaagaacttgaagatattttgaatcaaa 11871
Query: 420 ttcttgataaagctaacttgcgtgacgcagaagacgacgatgaaagccaggtcattgamg 479
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 11872 ttcttgataaagctaacttgcgtgacgcagaagacgacgatgaaagcaaggtcattgaag 11931
Query: 480 aacaattmmmtcagctagaycttatmgabyycsatgatgatgatgamagcgacaaammat 539
||||||| ||||||||| ||||| || ||||||||||||| ||||||||| ||
Sbjct: 11932 aacaattaaatcagctagatcttatagattttgatgatgatgatgaaagcgacaaaaaat 11991
Query: 540 cagctaamtcctatgacacymtgtcaacyttgcctcatgccagayttmmcgctgcgactg 599
||||||| |||||||| || ||||||| ||||||||||||||| || |||||||||||
Sbjct: 11992 cagctaaatcctatgaaactatgtcaactttgcctcatgccagatttaacgctgcgactg 12051
Query: 600 cygttgtggatgacacgtyattcatcttcggtggtactgttgacattsgcgaaamasact 659
| ||||||||||| |||| |||||||||||||||||||||||| ||| |||||| | |||
Sbjct: 12052 ctgttgtggatgatacgttattcatcttcggtggtactgttgaaattggcgaaaaagact 12111
Query: 660 atccaatcgactcctttcacagcattgatatgaacaaacttgatggggtgaaggtgtwct 719
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 12112 atccaatcgactccttttacagcattgatatgaacaaacttgatggggtgaaggtgtact 12171
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.45 0.721 1.37
Gapped
Lambda K H
1.45 0.721 1.37
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4054
Number of Sequences: 1807
Number of extensions: 4054
Number of successful extensions: 108
Number of sequences better than 1.0e-20: 1
length of query: 719
length of database: 10,358,551
effective HSP length: 16
effective length of query: 703
effective length of database: 10,329,639
effective search space: 7261736217
effective search space used: 7261736217
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.2 bits)
S1: 11 (23.4 bits)
S2: 48 (100.7 bits)